Overview Annotation GWAS Evidence Associated genes

P17966

Metabolite ID
P17966
Deionized mass
506.1930 Da
Average m/z
507.1995
Average RT
12.6698
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.221e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.709e-11
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 1Chr08:11253074–11256505 (+)1.992e-11
Glyma.09G056900 hypothetical protein NA 1Chr09:5128829–5132737 (+)8.805e-11
Glyma.09G057000 hypothetical protein NA 1Chr09:5140625–5145658 (+)8.805e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.578e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.389e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)5.098e-11