Overview Annotation GWAS Evidence Associated genes

P17962

Metabolite ID
P17962
Deionized mass
338.0961 Da
Average m/z
339.1042
Average RT
12.6691
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G309600 hypothetical protein NA 2Chr13:40521916–40525060 (+)2.289e-13
Glyma.13G311400 hypothetical protein NA 2Chr13:40689747–40691833 (+)7.561e-19
Glyma.13G312100 hypothetical protein AT5G24670:EMB2820:Cytidine/deoxycytidylate deaminase family protein 2Chr13:40721652–40729349 (+)3.625e-15
Glyma.13G312600 hypothetical protein AT3G18970:MEF20:mitochondrial editing factor 20 2Chr13:40780916–40784110 (+)7.561e-19
Glyma.13G309500 hypothetical protein NA 1Chr13:40521653–40522211 (+)1.211e-12
Glyma.13G311200 hypothetical protein AT1G08465:YAB2:Plant-specific transcription factor YABBY family protein 1Chr13:40661534–40670702 (+)3.198e-11
Glyma.13G311600 hypothetical protein AT5G22060:J2:DNAJ homologue 2__AT3G44110:J3:DNAJ homologue 3 1Chr13:40695198–40697649 (-)2.289e-13
Glyma.13G311700 hypothetical protein AT3G22190:IQD5:IQ-domain 5 1Chr13:40700938–40707433 (+)2.289e-13
Glyma.13G312200 hypothetical protein AT1G08410:AT1G08410:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr13:40730888–40735478 (+)7.561e-19
Glyma.13G312300 hypothetical protein AT1G08420:BSL2:BRI1 suppressor 1 (BSU1)-like 2 1Chr13:40744377–40756946 (+)7.561e-19
Glyma.13G312400 hypothetical protein AT5G22080:AT5G22080:Chaperone DnaJ-domain superfamily protein 1Chr13:40757045–40762412 (-)2.289e-13
Glyma.13G313000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr13:40847341–40854727 (+)2.289e-13
Glyma.13G313100 hypothetical protein NA 1Chr13:40859477–40862477 (+)2.289e-13
Glyma.17G225200 hypothetical protein NA 1Chr17:37810638–37816106 (-)8.158e-11