Overview Annotation GWAS Evidence Associated genes

P17951

Metabolite ID
P17951
Deionized mass
584.2531 Da
Average m/z
585.2666
Average RT
12.6666
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.876e-11
Glyma.09G236000 hypothetical protein AT3G01150:PTB1:polypyrimidine tract-binding protein 1 1Chr09:45856580–45862836 (+)5.446e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)2.442e-11
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)5.197e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.755e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.755e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.596e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.132e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.596e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.596e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.012e-12