Overview Annotation GWAS Evidence Associated genes

P17824

Metabolite ID
P17824
Deionized mass
408.1147 Da
Average m/z
409.1225
Average RT
12.6350
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G086600 hypothetical protein NA 2Chr04:7374806–7380808 (+)2.159e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.574e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)2.583e-12
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)5.682e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)5.992e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)5.56e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)8.04e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)8.656e-12