Overview Annotation GWAS Evidence Associated genes

P17815

Metabolite ID
P17815
Deionized mass
485.2036 Da
Average m/z
486.2118
Average RT
12.6333
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
103
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

103 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)4.735e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 2Chr05:32021521–32025767 (-)1.83e-17
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.726e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.668e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.668e-15
Glyma.13G201600 hypothetical protein NA 2Chr13:31521512–31522992 (+)7.433e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.443e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.361e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.045e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)6.863e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)3.436e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.797e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.797e-11
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)4.023e-12
Glyma.02G081900 hypothetical protein AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein 1Chr02:7075646–7080163 (-)9.378e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.123e-11
Glyma.02G139200 hypothetical protein NA 1Chr02:14400900–14406156 (-)7.595e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.994e-14
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)1.224e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.94e-15
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)6.591e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)6.591e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.971e-16
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)2.248e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.757e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.21e-17
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.83e-17
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.918e-19
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.726e-19
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.726e-19
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.726e-19
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.843e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.862e-21
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.189e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.421e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)2.257e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)2.257e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)2.257e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.813e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.988e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)7.142e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)9.216e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.726e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.726e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.726e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.726e-14
Glyma.08G123100 hypothetical protein AT3G20050:TCP-1:T-complex protein 1 alpha subunit 1Chr08:9468076–9475710 (-)3.848e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.702e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)4.733e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)5.026e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.113e-14
Glyma.11G223200 hypothetical protein NA 1Chr11:31833899–31837181 (+)2.456e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.577e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.577e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.074e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.074e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.232e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.095e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.095e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.905e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.905e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.668e-15
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.847e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.38e-15
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)7.81e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.459e-12
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)2.614e-12
Glyma.14G133600 hypothetical protein AT4G31390:ACDO1:Protein kinase superfamily protein 1Chr14:23182134–23193763 (+)8.376e-11
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)7.306e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.361e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)2.57e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.248e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.717e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.248e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.248e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.127e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.649e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.657e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.657e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)6.306e-13
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)9.393e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)5.049e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)1.528e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)1.194e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.752e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.529e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.715e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.678e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.511e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.511e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)8.246e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.892e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.716e-12
Glyma.18G050000 hypothetical protein NA 1Chr18:4309070–4316534 (-)7.749e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)6.164e-12
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)4.654e-12
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.954e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)9.194e-13
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)2.907e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)2.245e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)5.547e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)4.247e-12
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:45347424–45357977 (-)6.375e-11