Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P17725

Metabolite ID
P17725
Deionized mass
370.1434 Da
Average m/z
371.1515
Average RT
12.6085
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.411e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)4.447e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)3.876e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.411e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)1.369e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)1.369e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)1.369e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)1.369e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)1.369e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)1.369e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)1.369e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)4.447e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.379e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.425e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.212e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)2.012e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)2.012e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)2.012e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)2.012e-11
Glyma.05G233700 COL11 zinc finger protein CONSTANS-LIKE 16-like AT1G68520:BBX14:B-box type zinc finger protein with CCT domain-containing protein 1Chr05:41087671–41089500 (+)1.201e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.789e-16
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.295e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.295e-15
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)7.142e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)5.532e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)5.532e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.893e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)1.535e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)1.885e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)1.253e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)1.37e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)1.371e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)1.371e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)6.73e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.401e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.401e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.401e-11
Glyma.13G168300 hypothetical protein AT5G20110:AT5G20110:Dynein light chain type 1 family protein 1Chr13:28265646–28268213 (+)1.035e-11
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr16:31774664–31777363 (+)1.882e-11
Glyma.16G157800 hypothetical protein NA 1Chr16:31832373–31834430 (-)3.085e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.141e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.141e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.323e-11
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 1Chr20:45791239–45803369 (-)2.942e-11