Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P17691

Metabolite ID
P17691
Deionized mass
239.0825 Da
Average m/z
240.0879
Average RT
12.5992
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)3.109e-12
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)2.884e-15
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)8.62e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.695e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.483e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.07e-17
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.07e-17
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)2.565e-11
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)2.565e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)3.13e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.508e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)1.411e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.53e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.53e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.53e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.676e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.233e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.215e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)4.762e-14
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)4.762e-14
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)4.204e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.695e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)7.695e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.695e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.695e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.937e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.937e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.513e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)8.045e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.483e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.205e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.109e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)7.575e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.596e-15
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.596e-15
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.07e-17
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.794e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.909e-13
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)2.408e-15
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)9.265e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)8.473e-12
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)4.532e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.006e-11
Glyma.20G107000 hypothetical protein NA 1Chr20:34968161–34968457 (+)2.069e-11
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)4.078e-12
Glyma.20G109100 hypothetical protein AT1G14590:AT1G14590:Nucleotide-diphospho-sugar transferase family protein 1Chr20:35166747–35171332 (+)4.078e-12
Glyma.20G114000 hypothetical protein NA 1Chr20:35578719–35584659 (-)1.514e-11