Overview Annotation GWAS Evidence Associated genes

P17637

Metabolite ID
P17637
Deionized mass
601.2832 Da
Average m/z
602.2842
Average RT
12.5839
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.66e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.215e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)7.529e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)7.529e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.351e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.35e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.35e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.35e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.317e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.66e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.817e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)5.817e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.088e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.499e-12
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)7.312e-11
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)6.589e-12