Overview Annotation GWAS Evidence Associated genes

P17600

Metabolite ID
P17600
Deionized mass
302.1886 Da
Average m/z
303.1953
Average RT
12.5768
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.278e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.278e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.009e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.03e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)7.599e-12
Glyma.18G290700 hypothetical protein AT5G57080:AT5G57080:uncharacterized protein__AT4G26055:AT4G26055:uncharacterized protein 1Chr18:56967231–56971413 (+)2.359e-11
Glyma.18G291800 hypothetical protein AT3G58140:AT3G58140:phenylalanyl-tRNA synthetase class IIc family protein 1Chr18:57038198–57048084 (+)2.686e-12
Glyma.18G292400 hypothetical protein NA 1Chr18:57076720–57077720 (+)2.686e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.939e-12
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)1.534e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)2.464e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.363e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.376e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.29e-11