Overview Annotation GWAS Evidence Associated genes

P17461

Metabolite ID
P17461
Deionized mass
650.1090 Da
Average m/z
651.1134
Average RT
12.5444
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 2Chr09:5661672–5675338 (-)4.794e-13
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)1.14e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.461e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)3.725e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)3.726e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)5.903e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.198e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.758e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)8.815e-12