Overview Annotation GWAS Evidence Associated genes

P17459

Metabolite ID
P17459
Deionized mass
653.1014 Da
Average m/z
654.1109
Average RT
12.5436
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G070200 hypothetical protein NA 3Chr11:5258153–5262782 (+)1.568e-11
Glyma.11G069700 hypothetical protein AT5G48330:RUG2:Regulator of chromosome condensation (RCC1) family protein 2Chr11:5240442–5242232 (-)1.568e-11
Glyma.11G070000 hypothetical protein AT2G18260:SYP112:syntaxin of plants 112 2Chr11:5247674–5249016 (-)2.361e-11
Glyma.11G015300 hypothetical protein AT3G60500:CER7:3'-5'-exoribonuclease family protein 1Chr11:1048122–1055388 (+)3.793e-15
Glyma.11G015900 hypothetical protein AT5G12410:AT5G12410:THUMP domain-containing protein 1Chr11:1113088–1117922 (+)4.157e-11
Glyma.11G069300 hypothetical protein AT4G36550:AT4G36550:ARM repeat superfamily protein 1Chr11:5211340–5217107 (+)9.886e-12
Glyma.11G070300 IFR1 isoflavone reductase homolog 1 NA 1Chr11:5264434–5266437 (+)1.568e-11
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)7.444e-12