Overview Annotation GWAS Evidence Associated genes

P17448

Metabolite ID
P17448
Deionized mass
198.1248 Da
Average m/z
199.1310
Average RT
12.5411
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)8.256e-12
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)2.707e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)8.23e-13
Glyma.09G233700 hypothetical protein AT1G33430:AT1G33430:Galactosyltransferase family protein 1Chr09:45632775–45635630 (-)3.429e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)9.26e-13
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.04e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)7.736e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)7.736e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)5.628e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.892e-12
Glyma.16G051600 hypothetical protein AT5G41100:AT5G41100:hydroxyproline-rich glycoprotein family protein__AT3G26910:AT3G26910:hydroxyproline-rich glycoprote… 1Chr16:4963950–4972993 (-)1.981e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)7.08e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)4.39e-11