Overview Annotation GWAS Evidence Associated genes

P17283

Metabolite ID
P17283
Deionized mass
174.0669 Da
Average m/z
175.0745
Average RT
12.4997
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)4.509e-13
Glyma.02G204300 hypothetical protein AT4G30560:CNGC9:cyclic nucleotide gated channel 9 2Chr02:38958949–38970855 (-)2.422e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 2Chr20:34151918–34155417 (+)8.699e-13
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)4.465e-12
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)3.971e-14
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 1Chr20:34179794–34183432 (-)8.699e-13