Overview Annotation GWAS Evidence Associated genes

P17238

Metabolite ID
P17238
Deionized mass
474.1732 Da
Average m/z
475.1767
Average RT
12.4865
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.928e-11
Glyma.06G184100 hypothetical protein NA 1Chr06:15897746–15902462 (+)9.412e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)6.146e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)3.712e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)8.819e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)5.074e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)9.452e-13
Glyma.18G079100 hypothetical protein NA 1Chr18:7600652–7603424 (-)4.407e-11