Overview Annotation GWAS Evidence Associated genes

P17072

Metabolite ID
P17072
Deionized mass
1156.3145 Da
Average m/z
1157.3194
Average RT
12.4449
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G202700 hypothetical protein AT5G16280:AT5G16280:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr03:41108071–41128352 (+)2.01e-15
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)2.447e-12
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)3.922e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)7.864e-11
Glyma.17G041000 hypothetical protein AT3G06950:AT3G06950:Pseudouridine synthase family protein 1Chr17:3025531–3029224 (+)9.696e-11
Glyma.17G041200 hypothetical protein NA 1Chr17:3041792–3047638 (+)9.696e-11
Glyma.17G041400 hypothetical protein NA 1Chr17:3076764–3083449 (+)9.696e-11
Glyma.17G041500 hypothetical protein AT1G48280:AT1G48280:hydroxyproline-rich glycoprotein family protein 1Chr17:3090237–3094970 (+)9.696e-11
Glyma.17G041700 hypothetical protein AT1G48310:CHR18:chromatin remodeling factor18 1Chr17:3099618–3109529 (-)9.696e-11