Overview Annotation GWAS Evidence Associated genes

P16969

Metabolite ID
P16969
Deionized mass
348.1275 Da
Average m/z
349.1374
Average RT
12.4204
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)3.403e-16
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.041e-17
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)1.118e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)4.078e-13
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)4.078e-13
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)7.306e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)1.584e-11
Glyma.07G074800 hypothetical protein AT3G16840:AT3G16840:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr07:6806841–6815545 (-)2.491e-12
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)6.121e-14
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)6.121e-14
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)8.098e-12
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)1.453e-11
Glyma.09G233700 hypothetical protein AT1G33430:AT1G33430:Galactosyltransferase family protein 1Chr09:45632775–45635630 (-)2.146e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.628e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.628e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.442e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.885e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)6.862e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.9e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.066e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.135e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)6.415e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.547e-14
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)4.048e-11
Glyma.16G148800 hypothetical protein AT3G02050:KUP3:K+ uptake transporter 3 1Chr16:30961069–30966306 (+)3.396e-12
Glyma.16G148900 Lipid transfer-like protein VAS AT5G13900:AT5G13900:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 1Chr16:30966315–30967677 (-)3.396e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.041e-17
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)2.371e-11