Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16868

Metabolite ID
P16868
Deionized mass
287.0516 Da
Average m/z
288.0575
Average RT
12.3855
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G063200 hypothetical protein NA 4Chr02:5680261–5682907 (-)3.686e-12
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 4Chr03:4472672–4477787 (-)2.671e-12
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 2Chr02:5645621–5648965 (+)5.541e-13
Glyma.02G063100 hypothetical protein AT2G23560:MES7:methyl esterase 7 2Chr02:5675594–5678429 (-)3.686e-12
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 2Chr07:6169729–6172231 (+)9.668e-13
Glyma.07G068600 hypothetical protein NA 2Chr07:6192764–6197166 (+)2.951e-13
Glyma.02G060700 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 1Chr02:5508103–5512617 (+)9.716e-11
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 1Chr02:5577271–5582873 (-)5.818e-13
Glyma.02G062800 hypothetical protein AT3G50430:AT3G50430:golgin 1Chr02:5663668–5670471 (+)1.767e-11
Glyma.02G063000 hypothetical protein AT4G37150:MES9:methyl esterase 9__AT2G23560:MES7:methyl esterase 7 1Chr02:5674394–5675971 (-)1.219e-11
Glyma.02G063300 hypothetical protein AT2G23610:MES3:methyl esterase 3 1Chr02:5685209–5687986 (-)3.686e-12
Glyma.02G063400 hypothetical protein NA 1Chr02:5688033–5690074 (-)3.346e-11
Glyma.02G063600 hypothetical protein AT2G23610:MES3:methyl esterase 3 1Chr02:5705744–5710339 (-)3.707e-13
Glyma.02G063800 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr02:5720590–5724380 (+)1.369e-12
Glyma.02G063900 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr02:5726822–5733698 (+)9.039e-12
Glyma.02G064200 hypothetical protein NA 1Chr02:5745915–5749251 (+)1.767e-11
Glyma.02G064300 hypothetical protein NA 1Chr02:5757818–5759434 (+)1.767e-11
Glyma.02G065300 hypothetical protein AT1G12820:AFB3:auxin signaling F-box 3 1Chr02:5811685–5815085 (-)7.618e-11
Glyma.02G067600 hypothetical protein NA 1Chr02:5975111–5976381 (+)1.328e-12
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)3.496e-11
Glyma.03G016800 hypothetical protein AT3G61140:FUS6:COP9 signalosome complex subunit 1 1Chr03:1690819–1696572 (-)3.496e-11
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)1.404e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.651e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.561e-11
Glyma.03G046000 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein 1Chr03:5848597–5849782 (-)1.834e-12
Glyma.03G046200 hypothetical protein NA 1Chr03:5895672–5899267 (+)2.528e-13
Glyma.03G058400 hypothetical protein NA 1Chr03:8306189–8315630 (-)3.274e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.372e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.144e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.144e-12
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)2.055e-12
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)2.951e-13
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)1.284e-13
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)1.284e-13
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)2.951e-13
Glyma.07G069600 hypothetical protein AT4G00370:ANTR2:Major facilitator superfamily protein 1Chr07:6307073–6313498 (-)7.197e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.595e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.247e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)4.811e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)4.426e-11
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)9.484e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)6.125e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.248e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)7.866e-11