Overview Annotation GWAS Evidence Associated genes

P16773

Metabolite ID
P16773
Deionized mass
424.1935 Da
Average m/z
425.1988
Average RT
12.3602
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)1.798e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.629e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)7.815e-11
Glyma.18G044000 hypothetical protein AT1G65920:AT1G65920:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 1Chr18:3777421–3789101 (-)6.351e-11
Glyma.18G044400 hypothetical protein AT3G03250:UGP1:UDP-GLUCOSE PYROPHOSPHORYLASE 1 1Chr18:3836270–3837813 (+)1.734e-11
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)7.488e-12
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)7.488e-12
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)7.488e-12
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)1.908e-11