Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16741

Metabolite ID
P16741
Deionized mass
415.1225 Da
Average m/z
416.1292
Average RT
12.3556
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.931e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.307e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.908e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.908e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.836e-11
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)8.043e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.329e-14
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.329e-14
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.212e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.199e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)8.465e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.905e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.411e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.627e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)7.184e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.307e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.307e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.307e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.307e-11
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)9.862e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)6.415e-15
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.293e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.293e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.293e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.75e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.75e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.783e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.366e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.366e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.545e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.545e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.908e-13
Glyma.13G166300 hypothetical protein NA 1Chr13:28110251–28113628 (-)4.215e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.004e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.836e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.761e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)6.513e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)5.943e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.216e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.045e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.413e-13
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)5.81e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.366e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.535e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.331e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.331e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)8.656e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)8.656e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)3.209e-12
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)7.664e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)4.381e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)6.895e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.389e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)9.096e-11