Overview Annotation GWAS Evidence Associated genes

P16663

Metabolite ID
P16663
Deionized mass
258.0843 Da
Average m/z
259.0929
Average RT
12.3405
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)6.404e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)8.212e-11
Glyma.04G176600 hypothetical protein AT1G74800:AT1G74800:Galactosyltransferase family protein 1Chr04:43967842–43971631 (-)6.175e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.97e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.112e-11
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 1Chr07:9118318–9120182 (-)8.55e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.181e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.091e-11