Overview Annotation GWAS Evidence Associated genes

P16555

Metabolite ID
P16555
Deionized mass
473.2242 Da
Average m/z
474.2277
Average RT
12.3124
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
32
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

32 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)4.315e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.204e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.204e-12
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)1.546e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.111e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)9.885e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.111e-11
Glyma.03G135200 hypothetical protein NA 1Chr03:35070964–35078620 (+)7.335e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)7.335e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.854e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.968e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)6.682e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.932e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.932e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.932e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.932e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.779e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.605e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.86e-12
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 1Chr13:24601574–24606756 (-)4.558e-11
Glyma.13G133900 hypothetical protein NA 1Chr13:24613843–24616128 (+)4.558e-11
Glyma.13G134000 hypothetical protein NA 1Chr13:24618272–24619048 (-)4.558e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.315e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.012e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.961e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.961e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.204e-12
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)3.49e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)3.49e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)7.745e-11
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:34998146–35001862 (+)2.37e-11
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 1Chr19:35024582–35025690 (+)2.37e-11