Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16445

Metabolite ID
P16445
Deionized mass
824.1687 Da
Average m/z
825.1695
Average RT
12.2781
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)6.047e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.459e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.78e-13
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.837e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.185e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.262e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.141e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.926e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.509e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.509e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.509e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.267e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.667e-12
Glyma.07G078000 hypothetical protein NA 1Chr07:7121636–7126695 (+)8.58e-12
Glyma.09G039000 hypothetical protein NA 1Chr09:3270971–3276530 (-)9.457e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.41e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.691e-12
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)1.691e-12
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)6.372e-11
Glyma.11G018000 hypothetical protein AT4G11040:AT4G11040:Protein phosphatase 2C family protein 1Chr11:1246178–1247949 (+)2.712e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.048e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.048e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.199e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.199e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.389e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.95e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.019e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.019e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.728e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.728e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.728e-11
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)7.584e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)2.259e-11
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… 1Chr15:8692505–8697919 (-)1.041e-13
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 1Chr15:8705907–8710609 (-)2.911e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.663e-11
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 1Chr16:1208240–1214310 (-)1.553e-11
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 1Chr16:1222829–1228462 (-)1.553e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.995e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)7.219e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)1.778e-11
Glyma.18G195500 hypothetical protein NA 1Chr18:46967195–46981775 (+)6.752e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.965e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.888e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.888e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.188e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)1.287e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.561e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)9.208e-12