Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16384

Metabolite ID
P16384
Deionized mass
137.0121 Da
Average m/z
138.0179
Average RT
12.2597
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.975e-13
Glyma.07G010200 hypothetical protein NA 2Chr07:753451–763749 (-)1.396e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)7.324e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.975e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.795e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)9.063e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.302e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.351e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.351e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.723e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.212e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.212e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.212e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.341e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.341e-11
Glyma.06G184100 hypothetical protein NA 1Chr06:15897746–15902462 (+)1.481e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)6.293e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)6.293e-11
Glyma.07G010500 hypothetical protein AT1G55150:RH20:DEA(D/H)-box RNA helicase family protein 1Chr07:803172–810263 (+)1.396e-11
Glyma.07G010600 hypothetical protein NA 1Chr07:811039–816200 (+)1.396e-11
Glyma.07G010800 hypothetical protein NA 1Chr07:824697–827823 (-)1.396e-11
Glyma.07G010900 hypothetical protein AT1G55180:PLDEPSILON:phospholipase D alpha 4 1Chr07:830443–834361 (-)1.396e-11
Glyma.07G011100 hypothetical protein AT3G13700:AT3G13700:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr07:843406–847022 (+)1.396e-11
Glyma.07G011200 hypothetical protein AT5G49010:SLD5:DNA replication protein-like protein 1Chr07:847783–850968 (-)1.396e-11
Glyma.07G011600 hypothetical protein AT3G21250:ABCC8:multidrug resistance-associated protein 6 1Chr07:885910–891586 (+)1.396e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)1.744e-14
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)1.744e-14
Glyma.07G014300 hypothetical protein NA 1Chr07:1115661–1120213 (-)5.57e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.793e-14
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)2.498e-11
Glyma.09G069400 hypothetical protein NA 1Chr09:7055066–7058933 (+)1.327e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.882e-11
Glyma.14G063600 hypothetical protein AT5G05840:AT5G05840:replication factor C subunit, putative (DUF620) 1Chr14:5163603–5167769 (+)7.027e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)7.324e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.467e-11
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr18:4503897–4512049 (+)8.376e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.27e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.27e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)1.696e-11