Overview Annotation GWAS Evidence Associated genes

P16253

Metabolite ID
P16253
Deionized mass
466.1452 Da
Average m/z
467.1525
Average RT
12.2203
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)2.615e-12
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)4.934e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)7.683e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.97e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.997e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)3.712e-13
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)7.677e-11
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)1.384e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.244e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)6.323e-11
Glyma.13G045400 hypothetical protein NA 1Chr13:13925441–13941746 (+)4.605e-14
Glyma.13G046000 hypothetical protein AT5G16120:AT5G16120:alpha/beta-Hydrolases superfamily protein 1Chr13:14021814–14027430 (-)2.46e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)1.57e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)4.417e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)9.781e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.259e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.259e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.036e-11