Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16008

Metabolite ID
P16008
Deionized mass
434.1200 Da
Average m/z
435.1278
Average RT
12.1494
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)5.421e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.281e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.281e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)5.917e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)5.331e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)1.039e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.824e-14
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.889e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.083e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)9.726e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)5.343e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)5.343e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)5.343e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)5.343e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)5.343e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)5.343e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)5.343e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.668e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.668e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)9.577e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.287e-13
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)7.962e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)7.962e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)7.962e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)7.962e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.264e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.401e-17
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.392e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.807e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.851e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.635e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)7.372e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)2.15e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)5.353e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)5.353e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)7.314e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.921e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)7.939e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.974e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.008e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.008e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.792e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.792e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.55e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.55e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.281e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)3.298e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.188e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)5.917e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.159e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.096e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.831e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.831e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)2.121e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.752e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.689e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.689e-11