Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15941

Metabolite ID
P15941
Deionized mass
320.0905 Da
Average m/z
321.0964
Average RT
12.1350
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 5Chr08:11525692–11536927 (+)2.62e-14
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)4.359e-14
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)1.121e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)4.648e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)5.059e-11
Glyma.11G145000 hypothetical protein AT4G27490:RRP41L:3'-5'-exoribonuclease family protein 2Chr11:11117760–11123162 (+)3.353e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.424e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.424e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)3.599e-11
Glyma.03G036500 WNK5 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr03:4402746–4408323 (+)8.425e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.16e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.635e-14
Glyma.05G204600 hypothetical protein NA 1Chr05:38801528–38802396 (+)4.041e-11
Glyma.05G206200 hypothetical protein AT1G63410:AT1G63410:LURP-one-like protein (DUF567) 1Chr05:38904753–38908922 (-)4.121e-12
Glyma.05G207900 hypothetical protein AT4G11450:AT4G11450:bromo-adjacent domain protein, putative (DUF3527) 1Chr05:39000306–39005331 (+)2.865e-11
Glyma.05G208000 hypothetical protein NA 1Chr05:39007106–39011525 (-)2.865e-11
Glyma.05G208100 hypothetical protein AT1G63640:AT1G63640:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-co… 1Chr05:39013785–39022216 (-)2.865e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)2.581e-14
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.909e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.709e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.979e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.329e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.265e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.082e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.082e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.082e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.6e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.293e-11
Glyma.06G260500 hypothetical protein NA 1Chr06:44554415–44557883 (+)7.737e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.46e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.376e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)9.374e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.648e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.648e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.648e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.648e-11
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)3.598e-14
Glyma.08G150300 hypothetical protein NA 1Chr08:11550134–11555581 (+)1.08e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)7.524e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.207e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)8.981e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)3.004e-13
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)8.981e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.578e-14
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.578e-14
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)3.525e-12
Glyma.11G144800 hypothetical protein AT2G28250:NCRK:Protein kinase superfamily protein 1Chr11:11096950–11105343 (+)3.353e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)1.047e-12
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)1.637e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.04e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.04e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.424e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.226e-12
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)4.342e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.512e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.37e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)9.974e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)6.598e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)6.356e-11
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)2.171e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.391e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)2.582e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)7.807e-11
Glyma.17G217900 hypothetical protein NA 1Chr17:36771760–36778616 (-)4.124e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)7.49e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)7.489e-11
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)9.876e-12
Glyma.17G258200 GASA29 gibberellin-regulated protein 29 NA 1Chr17:41222782–41223797 (-)7.682e-12
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)7.072e-13
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)4.625e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)4.552e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)3.686e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)8.455e-13
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)6.947e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)2.995e-12