Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15935

Metabolite ID
P15935
Deionized mass
844.2268 Da
Average m/z
845.2373
Average RT
12.1333
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.183e-12
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 2Chr12:3949453–3957386 (-)1.09e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.544e-14
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)7.987e-12
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)5.798e-12
Glyma.18G201700 hypothetical protein NA 2Chr18:48175554–48180264 (+)4.381e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.653e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.653e-11
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)4.706e-14
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.476e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)3.927e-13
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)3.927e-13
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)3.927e-13
Glyma.02G304500 hypothetical protein AT5G48300:ADG1:ADP glucose pyrophosphorylase 1 1Chr02:47950037–47954106 (+)4.676e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.637e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.659e-12
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)5.464e-11
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)2.534e-13
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)1.081e-13
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)3.481e-12
Glyma.05G149200 hypothetical protein NA 1Chr05:34347910–34353885 (-)2.022e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.217e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)1.062e-12
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)8.286e-11
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)1.871e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)1.871e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)1.871e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)1.871e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.727e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.727e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.659e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.183e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.183e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.183e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.183e-12
Glyma.09G234200 hypothetical protein NA 1Chr09:45661404–45666997 (+)3.175e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)5.3e-12
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)3.918e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)9.591e-11
Glyma.12G054500 hypothetical protein NA 1Chr12:3938604–3943724 (+)3.086e-12
Glyma.12G055100 hypothetical protein AT5G12900:AT5G12900:DNA double-strand break repair RAD50 ATPase 1Chr12:3988442–3991287 (-)5.081e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.301e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.301e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.897e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.897e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.457e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)9.713e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.127e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)6.282e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.544e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.408e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.493e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.071e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.725e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.31e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)8.016e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)1.753e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)2.022e-13
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.91e-12