Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15931

Metabolite ID
P15931
Deionized mass
426.1487 Da
Average m/z
427.1580
Average RT
12.1327
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.797e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.13e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.13e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)7.82e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.25e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.256e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.248e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)3.047e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)5.856e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.886e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.136e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.411e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.337e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.381e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.797e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.797e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.797e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.797e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)8.955e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.113e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.113e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.113e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.113e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.433e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.533e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.054e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.003e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.003e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.003e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.003e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.966e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.966e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.095e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.534e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.534e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.13e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.262e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.539e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.992e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.539e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.539e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)7.561e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)7.82e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.392e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.392e-12