Overview Annotation GWAS Evidence Associated genes

P15921

Metabolite ID
P15921
Deionized mass
576.3189 Da
Average m/z
577.3292
Average RT
12.1304
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)7.369e-15
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.249e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.345e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.464e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)1.395e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.173e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.809e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.81e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8e-12
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)8.296e-13
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 2Chr19:860974–865476 (+)2.214e-15
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.249e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.88e-13
Glyma.03G035800 hypothetical protein NA 1Chr03:4317466–4321009 (+)8.625e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.614e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.008e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.12e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.259e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.095e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.095e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.608e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)6.046e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.345e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.345e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.115e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.548e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)6.595e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.235e-13
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.185e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.582e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.582e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.253e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.258e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.258e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.715e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.464e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.233e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.637e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.637e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.809e-15
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)6.953e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.351e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)7.874e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)7.874e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.022e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.638e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.022e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.022e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.731e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.216e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.338e-13
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)1.544e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.578e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.968e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.306e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)4.771e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)7.491e-13
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.266e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)7.492e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)4.142e-12
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)9.186e-12
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)2.865e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)6.225e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)5.437e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)6.225e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)6.225e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.022e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.022e-14