Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15790

Metabolite ID
P15790
Deionized mass
393.2328 Da
Average m/z
394.2389
Average RT
12.0910
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)3.507e-11
Glyma.07G068600 hypothetical protein NA 2Chr07:6192764–6197166 (+)1.48e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.771e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.269e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.269e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.269e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.333e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.312e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.395e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.599e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.339e-11
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)1.834e-11
Glyma.07G068300 hypothetical protein AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase 1Chr07:6169729–6172231 (+)2.894e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)1.48e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)8.994e-12
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)8.994e-12
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)1.48e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.027e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)5.952e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)5.952e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.771e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.771e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.771e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.771e-11
Glyma.09G236000 hypothetical protein AT3G01150:PTB1:polypyrimidine tract-binding protein 1 1Chr09:45856580–45862836 (+)3.966e-11
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)9.603e-12
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)1.836e-13
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)4.5e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.269e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.269e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.269e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.269e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.269e-11
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)3.695e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)8.531e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)8.493e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)8.493e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)8.493e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)8.493e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.838e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.134e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.312e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.429e-13
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.429e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.429e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.138e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.024e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.363e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)9.927e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.725e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.293e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.991e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.712e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)3.507e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)4.884e-11