Overview Annotation GWAS Evidence Associated genes

P15646

Metabolite ID
P15646
Deionized mass
424.1837 Da
Average m/z
425.1923
Average RT
12.0552
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.656e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.462e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.315e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.459e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.273e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.872e-14
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)1.771e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)8.99e-11
Glyma.08G350900 hypothetical protein AT3G25030:AT3G25030:RING/U-box superfamily protein__AT3G07120:AT3G07120:RING/U-box superfamily protein 1Chr08:46461098–46464368 (+)5.851e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.58e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.58e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.58e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.58e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.114e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.476e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.126e-16
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.537e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.537e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.272e-12
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)1.349e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.973e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.772e-11