Overview Annotation GWAS Evidence Associated genes

P15621

Metabolite ID
P15621
Deionized mass
174.0297 Da
Average m/z
175.0372
Average RT
12.0507
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G218800 hypothetical protein AT1G63430:AT1G63430:Leucine-rich repeat protein kinase family protein 1Chr01:54860809–54866642 (+)4.538e-11
Glyma.01G219700 hypothetical protein AT3G52905:AT3G52905:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr01:54908697–54911774 (-)4.538e-11
Glyma.01G220100 hypothetical protein NA 1Chr01:54947015–54948375 (+)4.538e-11
Glyma.03G041500 hypothetical protein NA 1Chr03:5249601–5251509 (-)2.678e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.002e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)8.438e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)3.781e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.222e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)6.081e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)6.081e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)6.081e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)6.081e-12