Overview Annotation GWAS Evidence Associated genes

P15558

Metabolite ID
P15558
Deionized mass
433.1889 Da
Average m/z
434.1965
Average RT
12.0348
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)7.243e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.212e-11
Glyma.08G148700 hypothetical protein NA 1Chr08:11384601–11387727 (-)8.961e-12
Glyma.09G065900 hypothetical protein NA 1Chr09:6419980–6421918 (+)1.426e-11
Glyma.09G066000 hypothetical protein NA 1Chr09:6431656–6439981 (-)1.426e-11
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 1Chr09:6475361–6486120 (+)1.426e-11
Glyma.16G033500 hypothetical protein AT4G00295:AT4G00295:fringe-like protein__AT1G01570:AT1G01570:transferring glycosyl group transferase (DUF604) 1Chr16:3152014–3156923 (+)2.345e-13
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)2.092e-12