Overview Annotation GWAS Evidence Associated genes

P15517

Metabolite ID
P15517
Deionized mass
174.0689 Da
Average m/z
175.0758
Average RT
12.0281
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)3.193e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.611e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)9.958e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)7.236e-13
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)9.628e-13
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)9.628e-13
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)9.628e-13
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 1Chr12:197288–200229 (+)5.967e-12
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 1Chr12:285588–289372 (-)1.098e-12
Glyma.12G003900 hypothetical protein AT5G51550:EXL3:EXORDIUM like 3 1Chr12:302437–304546 (+)2.975e-12
Glyma.13G171300 hypothetical protein AT5G45920:AT5G45920:SGNH hydrolase-type esterase superfamily protein 1Chr13:28543595–28547447 (+)6.437e-11
Glyma.14G083200 hypothetical protein NA 1Chr14:7249145–7256947 (-)2.129e-11
Glyma.14G084200 hypothetical protein NA 1Chr14:7375402–7379417 (-)4.837e-14