Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15478

Metabolite ID
P15478
Deionized mass
306.1583 Da
Average m/z
307.1670
Average RT
12.0206
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
40
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

40 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.121e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.121e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.937e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)8.566e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.876e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)5.888e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)8.316e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)3.526e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)5.576e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.064e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)5.01e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)2.165e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)2.165e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.289e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.547e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.547e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)3.494e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)4.48e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.878e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.502e-12
Glyma.08G123500 hypothetical protein NA 1Chr08:9494946–9505931 (-)5.549e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.002e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.002e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.686e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.239e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)3.038e-12
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)1.896e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.326e-11
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)8.582e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.482e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.482e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.482e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.582e-14
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.365e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.504e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.504e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)2.737e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.064e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)5.478e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.132e-14