Overview Annotation GWAS Evidence Associated genes

P15424

Metabolite ID
P15424
Deionized mass
492.0899 Da
Average m/z
493.0958
Average RT
12.0085
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G063200 hypothetical protein NA 2Chr18:5779244–5784529 (+)5.948e-11
Glyma.18G063400 hypothetical protein AT2G29940:ABCG31:pleiotropic drug resistance 3 2Chr18:5796259–5805903 (-)5.947e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)3.395e-12
Glyma.18G105800 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein 2Chr18:11773374–11782733 (+)2.915e-13
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)3.117e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.766e-12
Glyma.14G043700 hypothetical protein NA 1Chr14:3325888–3327935 (-)2.032e-12
Glyma.18G062800 hypothetical protein NA 1Chr18:5752483–5753187 (+)5.948e-11
Glyma.18G064000 hypothetical protein AT1G07230:NPC1:non-specific phospholipase C1 1Chr18:5847976–5851846 (-)5.947e-11
Glyma.18G064700 hypothetical protein AT5G58930:AT5G58930:__AT3G46990:AT3G46990:DUF740 family protein, putative (DUF740) 1Chr18:5893632–5895734 (+)5.948e-11
Glyma.18G065700 hypothetical protein AT2G29630:THIC:thiaminC 1Chr18:6008424–6016165 (+)5.948e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)3.395e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)2.901e-12
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)3.395e-12
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)2.499e-12
Glyma.18G105900 hypothetical protein AT3G58790:GAUT15:galacturonosyltransferase 15 1Chr18:11816666–11825810 (-)2.124e-12
Glyma.18G106300 hypothetical protein NA 1Chr18:11900700–11905446 (-)2.915e-13
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)9.254e-16
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)5.382e-12
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)5.382e-12