Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15330

Metabolite ID
P15330
Deionized mass
818.3149 Da
Average m/z
819.3254
Average RT
11.9689
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 2Chr09:47254519–47261787 (-)1.127e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.4e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)6.17e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)2.421e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.484e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.484e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)7.073e-11
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)5.066e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.174e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.833e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.342e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.139e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.102e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.33e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.512e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.512e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.519e-11
Glyma.07G068500 hypothetical protein AT3G54980:AT3G54980:Pentatricopeptide repeat (PPR) superfamily protein__AT2G39230:LOJ:LATERAL ORGAN JUNCTION 1Chr07:6184449–6187743 (-)5.911e-11
Glyma.07G070300 hypothetical protein AT2G45910:AT2G45910:U-box domain-containing protein kinase family protein 1Chr07:6364435–6372387 (-)3.811e-11
Glyma.07G209600 hypothetical protein NA 1Chr07:38037644–38043272 (+)2.259e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)1.726e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)7.1e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)7.1e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.183e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.581e-13
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)8.033e-14
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)3.873e-11
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)1.127e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)1.561e-13
Glyma.09G252400 hypothetical protein NA 1Chr09:47260143–47260334 (+)1.601e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)3.126e-15
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)3.126e-15
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)6.904e-17
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.614e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.614e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)4.54e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)7.29e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)7.97e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.01e-13
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)9.993e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)9.993e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.4e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.382e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.542e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.382e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.382e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.483e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.335e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.521e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)3.352e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)4.589e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.083e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.72e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.31e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)4.944e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)3.376e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.123e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.103e-11
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)3.904e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)8.39e-13
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)5.824e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)6.17e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)8.123e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)7.891e-12
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)5.657e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)7.805e-12
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)2.445e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.5e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.5e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.835e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)9.201e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.6e-15