Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15282

Metabolite ID
P15282
Deionized mass
734.2920 Da
Average m/z
735.2988
Average RT
11.9553
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
74
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

74 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)9.549e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)4.294e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)5.279e-17
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)5.279e-17
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.279e-17
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.164e-13
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.164e-13
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.164e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.067e-13
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)4.508e-12
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)7.702e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.882e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.318e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)4.144e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.691e-15
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)6.739e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)9.522e-15
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)9.522e-15
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.554e-16
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.825e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.825e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.825e-15
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)9.365e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.53e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.372e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.978e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.455e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.557e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.1e-15
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.8e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.416e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)2.595e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)2.595e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)4.272e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.279e-17
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)4.832e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.279e-17
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.873e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.163e-13
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.163e-13
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.164e-13
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.164e-13
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.164e-13
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.326e-12
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)4.374e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)6.166e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.805e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.805e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.206e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.206e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.206e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.91e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.972e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)3.449e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.133e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)9.55e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)9.55e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)9.55e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)9.55e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.132e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.493e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)4.375e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)5.011e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.596e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.697e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.697e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.985e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.985e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)6.357e-11
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)1.816e-12
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)1.816e-12
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)5.987e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.326e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)2.681e-11