Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15227

Metabolite ID
P15227
Deionized mass
777.3717 Da
Average m/z
778.3768
Average RT
11.9473
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)6.143e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)1.485e-11
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 3Chr18:12220182–12260477 (+)1.781e-11
Glyma.05G127500 hypothetical protein NA 2Chr05:32041345–32049554 (+)1.786e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)3.907e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)8.989e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)8.36e-11
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 1Chr03:758088–760465 (-)1.152e-12
Glyma.03G007900 hypothetical protein NA 1Chr03:764330–766878 (-)4.861e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.525e-11
Glyma.04G096300 hypothetical protein NA 1Chr04:8635554–8654734 (+)5.729e-11
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)6.143e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)6.143e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)6.143e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.437e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.356e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)9.15e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)9.15e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.008e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.008e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.008e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.479e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.03e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.979e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)5.728e-13
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.711e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)2.519e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)2.519e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)6.259e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.157e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)9.151e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.017e-11
Glyma.16G093700 hypothetical protein NA 1Chr16:15100987–15107038 (+)1.676e-12
Glyma.16G093800 hypothetical protein NA 1Chr16:15144247–15160454 (-)1.676e-12
Glyma.16G094200 hypothetical protein NA 1Chr16:15770075–15772475 (-)1.676e-12
Glyma.16G094300 hypothetical protein AT5G44650:CEST:death domain associated protein 1Chr16:15796268–15811033 (-)1.676e-12
Glyma.16G094500 hypothetical protein AT1G30825:DIS2:Arp2/3 complex, 34 kD subunit p34-Arc 1Chr16:15914865–15930406 (-)1.676e-12
Glyma.16G095100 hypothetical protein AT1G32080:LrgB:uncharacterized protein 1Chr16:16891012–16896814 (-)1.676e-12
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 1Chr16:16911412–16924907 (-)1.676e-12
Glyma.16G096000 Site-2 protease AT4G20310:AT4G20310:Peptidase M50 family protein 1Chr16:17694666–17720668 (+)1.676e-12
Glyma.16G096600 hypothetical protein AT5G58140:PHOT2:phototropin 2 1Chr16:18621149–18647713 (-)1.676e-12
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 1Chr16:18767931–18777350 (-)1.676e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.571e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.643e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)5.517e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)5.517e-11
Glyma.17G153900 hypothetical protein AT5G46580:AT5G46580:pentatricopeptide (PPR) repeat-containing protein 1Chr17:12919733–12922117 (-)8.146e-11
Glyma.17G154300 hypothetical protein AT5G46610:AT5G46610:aluminum activated malate transporter family protein 1Chr17:12986575–12990804 (-)9.966e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)1.485e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)5.694e-13
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)1.194e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)1.194e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)5.473e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)3.893e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)5.473e-11