Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14960

Metabolite ID
P14960
Deionized mass
495.1887 Da
Average m/z
496.1981
Average RT
11.8996
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)1.092e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.039e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.608e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.789e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.89e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.178e-13
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)3.468e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.57e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)7.313e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.333e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.889e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.606e-16
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.889e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.471e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)8.899e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.797e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)8.182e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.147e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.001e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.544e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)6.182e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.796e-12
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)7.279e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)3.31e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.331e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)7.373e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.31e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.015e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.015e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.644e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.644e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.967e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.89e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.178e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.493e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.603e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.039e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.039e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.039e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.039e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.375e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.896e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.046e-13
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)5.182e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)5.182e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)4.984e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)4.797e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.243e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.243e-12