Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14899

Metabolite ID
P14899
Deionized mass
273.1588 Da
Average m/z
274.1671
Average RT
11.8835
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
118
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

118 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 4Chr16:26324650–26336836 (+)1.962e-14
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.826e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)5.627e-13
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.376e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)7.822e-12
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)6.516e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.073e-11
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)1.516e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)1.927e-16
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.791e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)5.856e-16
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 2Chr12:37131153–37134096 (+)3.211e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.688e-11
Glyma.13G201600 hypothetical protein NA 2Chr13:31521512–31522992 (+)1.293e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.7e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.725e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)9.758e-15
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.826e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.953e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.953e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.952e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.087e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.731e-14
Glyma.03G036700 hypothetical protein AT5G01830:SAUR21:ARM repeat superfamily protein 1Chr03:4440551–4443406 (-)1.067e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)3.631e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)4.408e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.109e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.246e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.616e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)8.195e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)2.021e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)2.021e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)2.021e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)2.021e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)2.021e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)2.021e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)2.021e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)2.021e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)2.021e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)2.021e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)8.677e-13
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)2.811e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)6.823e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.16e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.073e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.073e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.073e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.073e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)7.125e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.149e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.163e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.986e-14
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)5.601e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)5.601e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.217e-16
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.217e-16
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.217e-16
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.217e-16
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)2.487e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.987e-17
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)2.487e-12
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)3.267e-14
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)5.851e-12
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)1.65e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.845e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.845e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.499e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.856e-16
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)6.429e-14
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)7.426e-12
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)7.405e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.947e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.688e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.372e-12
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)2.07e-11
Glyma.13G201300 hypothetical protein NA 1Chr13:31497499–31499001 (+)5.24e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)5.627e-13
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)1.748e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)5.627e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.773e-14
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.279e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.293e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.141e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)3.621e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)2.304e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)2.304e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.457e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.725e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)4.901e-11
Glyma.15G037600 hypothetical protein AT2G29050:RBL1:RHOMBOID-like 1 1Chr15:2964304–2967785 (+)5.26e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.531e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.262e-14
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.376e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.376e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.376e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.376e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)4.131e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.195e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)1.008e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)7.822e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)7.822e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.138e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.931e-15
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 1Chr16:33322352–33330062 (+)4.604e-11
Glyma.18G044400 hypothetical protein AT3G03250:UGP1:UDP-GLUCOSE PYROPHOSPHORYLASE 1 1Chr18:3836270–3837813 (+)8.058e-13
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)8.522e-14
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)8.522e-14
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)8.522e-14
Glyma.18G044900 hypothetical protein AT1G66120:AAE11:AMP-dependent synthetase and ligase family protein__AT1G68270:AT1G68270:AMP-dependent synthetase and li… 1Chr18:3881382–3884162 (+)5.204e-14
Glyma.18G045600 hypothetical protein NA 1Chr18:3947197–3952541 (+)1.66e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)1.819e-15
Glyma.18G045800 hypothetical protein AT3G02710:AT3G02710:ARM repeat superfamily protein 1Chr18:3960056–3964823 (-)1.66e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)6.49e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)4.561e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.723e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.012e-11
Glyma.20G108600 hypothetical protein NA 1Chr20:35099991–35104464 (+)7.13e-11
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)3.535e-11