Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14782

Metabolite ID
P14782
Deionized mass
175.1021 Da
Average m/z
176.1088
Average RT
11.8481
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 2Chr02:7553127–7557516 (-)6.528e-18
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)1.372e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)4.369e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 2Chr05:32125404–32138244 (+)3.43e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 2Chr09:4583416–4589291 (-)8.331e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)1.436e-11
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)4.362e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.003e-12
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)1.383e-12
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.293e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.531e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.43e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.43e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)2.09e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.894e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.894e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.894e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.703e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.703e-14
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)4.89e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.099e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)8.367e-12
Glyma.09G052100 hypothetical protein AT3G22230:AT3G22230:Ribosomal L27e protein family 1Chr09:4536612–4538089 (+)7.848e-11
Glyma.09G053800 hypothetical protein NA 1Chr09:4737413–4755632 (-)2.457e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)3.705e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)4.719e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.514e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.844e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.844e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)1.02e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.844e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.844e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)6.338e-12
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)6.338e-12
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)6.338e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.101e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.383e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.717e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.901e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.717e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.717e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.344e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.573e-15
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.651e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)3.464e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)8.866e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)1.812e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)1.99e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)1.812e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)1.812e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.278e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.278e-13