Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14500

Metabolite ID
P14500
Deionized mass
181.0403 Da
Average m/z
182.0489
Average RT
11.7726
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)5.808e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.381e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)2.598e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)5.029e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.367e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.214e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)4.485e-13
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)4.578e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.196e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.526e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.656e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.656e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.779e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.987e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.987e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.987e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)6.467e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.109e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.692e-18
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.9e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.636e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.636e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)8.283e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.715e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.381e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.381e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.381e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.381e-13
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.184e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.184e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.005e-12
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)9.992e-13
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)9.992e-13
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)9.992e-13
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 1Chr12:197288–200229 (+)8.149e-12
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.221e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)1.528e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.467e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.471e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)5.808e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.38e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.38e-12
Glyma.18G042300 hypothetical protein AT1G66140:ZFP4:zinc finger protein 4 1Chr18:3586380–3589732 (+)7.726e-11
Glyma.18G042500 hypothetical protein NA 1Chr18:3597323–3598404 (-)7.726e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)1.923e-11