Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14134

Metabolite ID
P14134
Deionized mass
624.2370 Da
Average m/z
625.2501
Average RT
11.6644
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.643e-20
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)2.756e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.999e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)4.359e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)5.388e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.026e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.026e-16
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)7.849e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)7.18e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.326e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)3.258e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)5.918e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)2.472e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.215e-13
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)5.872e-13
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.004e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.006e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)9.874e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.6e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.616e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.079e-15
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)5.017e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.013e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.013e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.311e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)3.939e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.999e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.999e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.999e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.999e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.06e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)5.859e-11
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)4.855e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.81e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.81e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.81e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.81e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)1.114e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.188e-11
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)1.114e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)9.807e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.449e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.912e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.912e-12
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)8.019e-14
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)2.068e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.913e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.983e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.983e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)5.389e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.978e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.979e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.026e-16
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.771e-12
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)1.257e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.902e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.625e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.331e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.625e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.625e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.798e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.327e-15
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)3.074e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.374e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.581e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.581e-12
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)2.252e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)2.51e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.722e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)9.168e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)1.446e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.884e-11