Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P14000

Metabolite ID
P14000
Deionized mass
494.1881 Da
Average m/z
495.1955
Average RT
11.6285
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G002800 hypothetical protein AT4G24290:AT4G24290:MAC/Perforin domain-containing protein 3Chr16:144387–154780 (+)4.737e-11
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.916e-12
Glyma.09G231100 hypothetical protein AT5G42970:COP8:Proteasome component (PCI) domain protein 2Chr09:45450922–45457330 (-)1.821e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)1.521e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.5e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.5e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.553e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.764e-11
Glyma.03G035800 hypothetical protein NA 1Chr03:4317466–4321009 (+)9.512e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)3.691e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)3.724e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.526e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.327e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.823e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.089e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.483e-15
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)7.87e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.509e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)8.046e-13
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)5.029e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)5.029e-11
Glyma.08G184300 hypothetical protein NA 1Chr08:14784345–14786953 (+)8.186e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.734e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.482e-12
Glyma.09G231600 hypothetical protein AT1G71692:AGL12:AGAMOUS-like 12 1Chr09:45485256–45489213 (+)7.695e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.255e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)6.236e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)4.567e-12
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)4.567e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.521e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.021e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.545e-11
Glyma.13G062700 hypothetical protein AT3G01180:SS2:starch synthase 2 1Chr13:16045152–16059846 (-)9.778e-11
Glyma.13G062800 hypothetical protein AT5G48600:SMC3:structural maintenance of chromosome 3 1Chr13:16067222–16078901 (-)9.778e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 1Chr13:24677399–24693129 (-)1.79e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.79e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.508e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.509e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.508e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.508e-11
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)8.037e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)6.081e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.168e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.933e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.833e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.097e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.244e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.097e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.097e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.22e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.226e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.248e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)8.739e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.19e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.356e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)6.076e-12
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)5.939e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)3.313e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)3.313e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)7.132e-12
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)3.514e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)9.747e-12
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)7.596e-11