Overview Annotation GWAS Evidence Associated genes

P13899

Metabolite ID
P13899
Deionized mass
348.1327 Da
Average m/z
349.1377
Average RT
11.5990
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G203800 hypothetical protein AT3G51800:ATG2:metallopeptidase M24 family protein 3Chr18:48621415–48625864 (+)2.343e-12
Glyma.18G203900 hypothetical protein AT3G08960:AT3G08960:ARM repeat superfamily protein 2Chr18:48636449–48660329 (-)2.343e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.179e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.128e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.89e-12
Glyma.09G168700 hypothetical protein AT3G17690:CNGC19:cyclic nucleotide gated channel 19 1Chr09:39338715–39352099 (-)2.177e-12
Glyma.10G187600 hypothetical protein NA 1Chr10:42055791–42063117 (-)7.061e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)7.71e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.934e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)4.394e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.921e-14
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)9.921e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.258e-11
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)9.899e-11
Glyma.20G177500 hypothetical protein AT5G63220:AT5G63220:golgi-to-ER traffic-like protein 1Chr20:41470287–41483978 (+)2.531e-11