Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13868

Metabolite ID
P13868
Deionized mass
198.1223 Da
Average m/z
199.1300
Average RT
11.5871
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
60
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

60 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 2Chr14:1009519–1014238 (+)1.729e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.255e-17
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.299e-12
Glyma.01G218800 hypothetical protein AT1G63430:AT1G63430:Leucine-rich repeat protein kinase family protein 1Chr01:54860809–54866642 (+)7.056e-11
Glyma.01G219700 hypothetical protein AT3G52905:AT3G52905:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr01:54908697–54911774 (-)7.056e-11
Glyma.01G220100 hypothetical protein NA 1Chr01:54947015–54948375 (+)7.056e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.223e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)7.169e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.65e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.732e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)6.375e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.857e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.808e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.222e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)2.314e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.203e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.384e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)8.557e-11
Glyma.06G319500 hypothetical protein NA 1Chr06:50828930–50845232 (-)2.046e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)9.129e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)9.128e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)2.456e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.722e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.047e-13
Glyma.09G133800 hypothetical protein NA 1Chr09:33268295–33269240 (+)5.355e-13
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)7.887e-13
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)4.334e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)4.918e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)8.329e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)6.1e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.207e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.207e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.013e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.535e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.535e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 1Chr13:24677399–24693129 (-)7.89e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)7.89e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.092e-14
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)7.05e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)6.15e-14
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.97e-13
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)1.615e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)1.615e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)1.615e-11
Glyma.14G078300 hypothetical protein NA 1Chr14:6622779–6631676 (+)2.509e-11
Glyma.14G078400 hypothetical protein NA 1Chr14:6634738–6639304 (+)2.791e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)2.241e-12
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)2.241e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.571e-17
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.299e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.811e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.095e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.811e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.811e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.205e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.846e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)5.107e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)5.107e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.883e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.128e-11