Overview Annotation GWAS Evidence Associated genes

P13788

Metabolite ID
P13788
Deionized mass
118.0991 Da
Average m/z
119.1053
Average RT
11.5618
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.511e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.075e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.647e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)4.514e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)7.827e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.665e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.83e-11
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr15:12680146–12681864 (-)2.528e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.955e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.921e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)5.69e-12