Overview Annotation GWAS Evidence Associated genes

P13590

Metabolite ID
P13590
Deionized mass
545.2883 Da
Average m/z
546.2946
Average RT
11.4895
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.82e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.82e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.692e-12
Glyma.05G122300 hypothetical protein AT3G60360:EDA14:embryo sac development arrest 14 1Chr05:31585853–31588967 (-)7.271e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.074e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.506e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.299e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.241e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.592e-12
Glyma.09G210200 hypothetical protein AT1G31940:AT1G31940:cystic fibrosis transmembrane conductance regulator 1Chr09:43432969–43437575 (-)7.598e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)5.776e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.82e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.82e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.582e-12
Glyma.13G136500 hypothetical protein NA 1Chr13:24910198–24916336 (-)8.898e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.891e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.87e-13