Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13460

Metabolite ID
P13460
Deionized mass
210.1233 Da
Average m/z
211.1308
Average RT
11.4515
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.481e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.29e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.011e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)6.021e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)4.292e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.411e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.326e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.352e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)7.046e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)7.046e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)7.046e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)7.046e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)7.046e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)7.046e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)7.047e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.052e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.3e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.329e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.084e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.74e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.035e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.035e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.035e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.917e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.693e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.996e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.996e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.275e-18
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.052e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.499e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.971e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)5.971e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.011e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.021e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.042e-11
Glyma.15G262400 hypothetical protein AT1G16310:AT1G16310:Cation efflux family protein__AT1G79520:AT1G79520:Cation efflux family protein 1Chr15:49495728–49499550 (+)9.306e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)4.136e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.857e-16
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)1.382e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)9.046e-13
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)2.041e-11